R1449__swab1550__MST016__PDS - SRA

SRX14166532: R1449__swab1550__MST016__PDS
1 ILLUMINA (Illumina MiSeq) run: 48,088 spots, 28.9M bases, 15.8Mb downloads

Design: MiSeq

Submitted by: University of Queensland

Study: Changes in the skin microbiome associated with squamous cell carcinoma in transplant recipients

PRJNA649052 • SRP274219 • All experiments • All runs

show Abstracthide Abstract

Actinic keratoses (AK) arise in severely photo-damaged skin and, over time, can progress to squamous cell carcinomas (SCC). Both AK and SCC are common in Caucasian populations, and immunosuppressed organ transplant recipients have a markedly higher risk of developing SCC. This project compared the microbiomes of AK and SCC with control skin from a cohort of 32 transplant recipients, and with similar samples from immunocompetent subjects.

Sample: R1449__swab1550__MST016__PDS

SAMN25894310 • SRS11990660 • All experiments • All runs

Organism: human skin metagenome

Library:

Name: R1449

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 48,088 spots, 28.9M bases, 15.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR18012095	48,088	28.9M	15.8Mb	2022-03-03

ID:: 19972502

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